MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1855c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1855c (requalified) — LLM class F420-dependent oxidoreductase Rv1855c Rv1856c (family_assigned) — SDR family oxidoreductase Rv1856c Rv3178 (requalified) — nitroreductase Rv3178 Rv3520c (requalified) — coenzyme F420-dependent oxidoreductase Rv3520c fbiA (requalified) — 2-phospho-L-lactate transferase fbiA ddn (requalified) — deazaflavin-dependent nitroreductase Ddn ddn Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv1261c (requalified) — F420H(2)-dependent quinone reductase Rv1261c Rv3072c (family_assigned) — hypothetical protein Rv3072c Rv1558 (requalified) — F420H(2)-dependent quinone reductase Rv1558 fbiB (requalified) — coenzyme F420-0:L-glutamate ligase fbiB cofC (requalified) — 2-phospho-L-lactate guanylyltransferase cofC ndh (requalified) — NAD(P)/FAD-dependent oxidoreductase ndh fas (requalified) — fatty acid synthase fas Rv2434c (requalified) — mechanosensitive ion channel Rv2434c pirG (requalified) — exported repetitive protein pirG modA (family_assigned) — molybdate ABC transporter substrate-binding protei modA modB (family_assigned) — ABC transporter permease modB Rv0044c (requalified) — LLM class F420-dependent oxidoreductase Rv0044c fgd1 (requalified) — glucose-6-phosphate dehydrogenase (coenzyme-F420) fgd1 Rv2951c (requalified) — phthiodiolone/phenolphthiodiolone dimycocerosates Rv2951c Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv3521 (family_assigned) — hypothetical protein Rv3521 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 fbiC (requalified) — bifunctional FO biosynthesis protein CofGH fbiC fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv2893 (requalified) — LLM class F420-dependent oxidoreductase Rv2893 Rv1262c (family_assigned) — HIT family protein Rv1262c Rv3073c (dark) — DUF488 domain-containing protein Rv3073c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c mmpL6 (requalified) — transmembrane transport protein MmpL6 mmpL6 ilvA (requalified) — threonine ammonia-lyase ilvA Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 ppa (requalified) — inorganic diphosphatase ppa gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.