MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1853 · 42 genes shown · anchor ureF · open gene page → · ← back to 1 hop

Evidence: Min score 0
ureD (requalified) — urease accessory protein UreD ureD ureF (requalified) — urease accessory protein UreF ureF ureG (requalified) — urease accessory protein UreG ureG ureB (family_assigned) — urease subunit beta ureB ureA (family_assigned) — urease subunit gamma ureA ureC (family_assigned) — urease subunit alpha ureC iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1847 (family_assigned) — PaaI family thioesterase Rv1847 ptrp (family_assigned) — hypothetical protein ptrp iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC iniA (requalified) — isoniazid inductible protein IniA iniA Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE embR (requalified) — response regulator transcription factor EmbR embR mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv3909 (dark) — hypothetical protein Rv3909 rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsP (requalified) — 30S ribosomal protein S16 rpsP rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsI (requalified) — 30S ribosomal protein S9 rpsI iniB (requalified) — isoniazid-induced protein IniB iniB Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv2264c (family_assigned) — Hsp70 family protein Rv2264c Rv3835 (family_assigned) — septum formation family protein Rv3835 pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB ftsQ (requalified) — cell division protein FtsQ ftsQ rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH mraZ (requalified) — division/cell wall cluster transcriptional repress mraZ Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.