MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1828 · 46 genes shown · anchor garA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 garA (requalified) — glycogen accumulation regulator GarA garA Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1829 (family_assigned) — hypothetical protein Rv1829 gcvH (requalified) — glycine cleavage system protein GcvH gcvH Rv1824 (family_assigned) — small basic family protein Rv1824 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 secA2 (requalified) — accessory Sec system translocase SecA2 secA2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 glnA4 (family_assigned) — glutamine synthetase family protein glnA4 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB gdh (requalified) — NAD-glutamate dehydrogenase gdh pknG (requalified) — serine/threonine protein kinase PknG pknG mec (requalified) — CysO-cysteine peptidase mec clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS Rv1333 (family_assigned) — P1 family peptidase Rv1333 Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 cysM (requalified) — O-phosphoserine sulfhydrylase cysM cysO (requalified) — sulfur carrier protein CysO cysO mpa (requalified) — proteasome ATPase mpa gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 Rv1825 (family_assigned) — DUF881 domain-containing protein Rv1825 Rv0012 (family_assigned) — membrane protein Rv0012 Rv3300c (family_assigned) — RluA family pseudouridine synthase Rv3300c pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA cdh (requalified) — CDP-diacylglycerol diphosphatase cdh plcB (requalified) — membrane-associated phospholipase B plcB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c secY (family_assigned) — preprotein translocase subunit SecY secY secE1 (requalified) — preprotein translocase SecE secE1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.