MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1827 · 46 genes shown · anchor pknB · open gene page → · ← back to 1 hop

Evidence: Min score 0
garA (requalified) — glycogen accumulation regulator GarA garA Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 gdh (requalified) — NAD-glutamate dehydrogenase gdh pknG (requalified) — serine/threonine protein kinase PknG pknG Rv1829 (family_assigned) — hypothetical protein Rv1829 gcvH (requalified) — glycine cleavage system protein GcvH gcvH Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c pknA (requalified) — serine/threonine protein kinase PknA pknA Rv1824 (family_assigned) — small basic family protein Rv1824 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c pknL (requalified) — protein kinase pknL lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP fhaA (requalified) — cell division-associated protein FhaA fhaA fhaB (family_assigned) — FHA domain-containing protein fhaB rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 Rv2475c (family_assigned) — thioesterase family protein Rv2475c rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA aspC (requalified) — pyridoxal phosphate-dependent aminotransferase aspC gltD (family_assigned) — glutamate synthase subunit beta gltD glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnX (requalified) — protein kinase G-activating protein GlnX glnX glnH (family_assigned) — glutamate ABC transporter substrate-binding protei glnH mutT3 (requalified) — 8-oxo-dGTP diphosphatase mutT3 pknF (requalified) — serine/threonine protein kinase PknF pknF mpa (requalified) — proteasome ATPase mpa Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.