MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1826 · 45 genes shown · anchor gcvB · open gene page → · ← back to 1 hop

Evidence: Min score 0
gcvH (requalified) — glycine cleavage system protein GcvH gcvH gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 lipA (requalified) — lipoyl synthase lipA lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB prsA (requalified) — ribose-phosphate diphosphokinase prsA glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv1825 (family_assigned) — DUF881 domain-containing protein Rv1825 purD (requalified) — phosphoribosylamine--glycine ligase purD folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA sdaA (requalified) — L-serine ammonia-lyase sdaA purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purN (requalified) — phosphoribosylglycinamide formyltransferase purN Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 fas (requalified) — fatty acid synthase fas Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 glmU (requalified) — bifunctional UDP-N-acetylglucosamine diphosphoryla glmU tkt (requalified) — transketolase tkt rbsK (requalified) — ribokinase RbsK rbsK purF (requalified) — amidophosphoribosyltransferase purF gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA Rv1824 (family_assigned) — small basic family protein Rv1824 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv0012 (family_assigned) — membrane protein Rv0012 secA2 (requalified) — accessory Sec system translocase SecA2 secA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.