MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1809 · 46 genes shown · anchor PPE32 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE33 (family_assigned) — PPE family protein PPE33 PPE33 PPE32 (family_assigned) — PPE family protein PPE32 PPE32 Rv1810 (family_assigned) — hypothetical protein Rv1810 mgtC (family_assigned) — MgtC/SapB family protein mgtC PE20 (family_assigned) — PE family protein PE20 PE20 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG PE_PGRS34 (family_assigned) — PE-PGRS family protein PE_PGRS34 PE_PGRS34 lppA (family_assigned) — LppA family lipoprotein lppA lppB (family_assigned) — LppA family lipoprotein lppB PPE31 (family_assigned) — PPE family protein PPE31 PPE31 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 Rv1352 (family_assigned) — hypothetical protein Rv1352 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 lppO (requalified) — lipoprotein LpqH lppO Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c ctpH (requalified) — cation-translocating P-type ATPase ctpH ctpF (requalified) — cation-transporting P-type ATPase ctpF ctpE (requalified) — cation-translocating P-type ATPase ctpE ctpI (requalified) — cation-transporter ATPase I ctpI Rv1805c (dark) — hypothetical protein Rv1805c PE29 (family_assigned) — PE family protein PE29 PE29 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 gltB (family_assigned) — glutamate synthase large subunit gltB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv1176c (family_assigned) — PadR family transcriptional regulator Rv1176c narH (family_assigned) — nitrate reductase subunit beta narH Rv0948c (requalified) — chorismate mutase Rv0948c aroB (requalified) — 3-dehydroquinate synthase aroB Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 Rv1885c (requalified) — chorismate mutase Rv1885c rplU (requalified) — 50S ribosomal protein L21 rplU rpsT (requalified) — 30S ribosomal protein S20 rpsT rplM (requalified) — 50S ribosomal protein L13 rplM rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmF (requalified) — 50S ribosomal protein L32 rpmF vapB18 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB18 vapC18 (family_assigned) — PIN domain nuclease vapC18 Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 vapC19 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC19

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.