MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1808 · 46 genes shown · anchor PPE33 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE32 (family_assigned) — PPE family protein PPE32 PPE32 PPE33 (family_assigned) — PPE family protein PPE33 PPE33 PPE31 (family_assigned) — PPE family protein PPE31 PPE31 Rv1810 (family_assigned) — hypothetical protein Rv1810 PE20 (family_assigned) — PE family protein PE20 PE20 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 Rv1352 (family_assigned) — hypothetical protein Rv1352 Rv0774c (requalified) — iron-stress inducible esterase Rv0774c rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB mutT1 (requalified) — NUDIX hydrolase mutT1 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c mgtC (family_assigned) — MgtC/SapB family protein mgtC fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG Rv1805c (dark) — hypothetical protein Rv1805c rplU (requalified) — 50S ribosomal protein L21 rplU PE24 (family_assigned) — PE family protein PE24 PE24 PE_PGRS40 (family_assigned) — PE-PGRS family protein PE_PGRS40 PE_PGRS40 eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 lppO (requalified) — lipoprotein LpqH lppO PE29 (family_assigned) — PE family protein PE29 PE29 PPE44 (family_assigned) — PPE family protein PPE44 PPE44 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA aofH (family_assigned) — flavin monoamine oxidase family protein aofH Rv1146 (requalified) — transmembrane transport protein Rv1146 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv0187 (requalified) — O-methyltransferase Rv0187 cobB (requalified) — NAD-dependent protein deacylase cobB hemZ (requalified) — ferrochelatase hemZ Rv1351 (dark) — hypothetical protein Rv1351 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 PPE26 (family_assigned) — PPE family protein PPE26 PPE26 Rv0431 (requalified) — tuberculin-like peptide Rv0431 ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA Rv0775 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0775 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c glnX (requalified) — protein kinase G-activating protein GlnX glnX eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 adhB (requalified) — alcohol dehydrogenase B adhB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.