MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1802 · 46 genes shown · anchor PPE29 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE30 (family_assigned) — PPE family protein PPE30 PPE30 PPE29 (family_assigned) — PPE family protein PPE29 PPE29 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv1584c (family_assigned) — hypothetical protein Rv1584c vapB12 (requalified) — antitoxin vapB12 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv1352 (family_assigned) — hypothetical protein Rv1352 Rv1585c (family_assigned) — hypothetical protein Rv1585c Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c Rv0187 (requalified) — O-methyltransferase Rv0187 PE20 (family_assigned) — PE family protein PE20 PE20 PE22 (family_assigned) — PE family protein PE22 PE22 PE_PGRS18 (family_assigned) — PE-PGRS family protein PE_PGRS18 PE_PGRS18 PE_PGRS46 (family_assigned) — PE-PGRS family protein PE_PGRS46 PE_PGRS46 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 Rv1146 (requalified) — transmembrane transport protein Rv1146 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 cobB (requalified) — NAD-dependent protein deacylase cobB hemZ (requalified) — ferrochelatase hemZ pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA aofH (family_assigned) — flavin monoamine oxidase family protein aofH rphA (requalified) — ribonuclease PH rphA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA murI (requalified) — glutamate racemase murI ndkA (requalified) — nucleoside-diphosphate kinase ndkA guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 Rv1583c (dark) — DUF2742 domain-containing protein Rv1583c Rv1582c (family_assigned) — phage/plasmid primase%2C P4 family Rv1582c Rv1586c (family_assigned) — recombinase family protein Rv1586c Rv1587c (family_assigned) — hypothetical protein Rv1587c Rv1588c (family_assigned) — hypothetical protein Rv1588c vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 Rv1722 (requalified) — biotin carboxylase Rv1722 Rv1723 (requalified) — serine hydrolase Rv1723 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB7 (requalified) — antitoxin vapB7 Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.