MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1800 · 45 genes shown · anchor lppT · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE28 (family_assigned) — PPE family protein PPE28 PPE28 PPE36 (family_assigned) — PPE family protein PPE36 PPE36 lppT (dark) — hypothetical protein lppT PE25 (family_assigned) — PE family protein PE25 PE25 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv1352 (family_assigned) — hypothetical protein Rv1352 PE36 (family_assigned) — PE family protein PE36 PE36 Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c PE22 (family_assigned) — PE family protein PE22 PE22 Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c PPE37 (family_assigned) — PPE family protein PPE37 PPE37 oplA (family_assigned) — hydantoinase B/oxoprolinase family protein oplA Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 sap (requalified) — sulfolipid-1 biosynthesis transporter Sap sap Rv3064c (family_assigned) — DoxX family protein Rv3064c Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c PPE41 (family_assigned) — PPE family protein PPE41 PPE41 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv2432c (dark) — hypothetical protein Rv2432c nrtS (requalified) — nitrate/nitrite transporter NrtS nrtS Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c Rv1146 (requalified) — transmembrane transport protein Rv1146 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv0187 (requalified) — O-methyltransferase Rv0187 cobB (requalified) — NAD-dependent protein deacylase cobB hemZ (requalified) — ferrochelatase hemZ pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA aofH (family_assigned) — flavin monoamine oxidase family protein aofH Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3092c (family_assigned) — DUF808 domain-containing protein Rv3092c Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv2405 (family_assigned) — hypothetical protein Rv2405 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1351 (dark) — hypothetical protein Rv1351 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.