MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1789 · 46 genes shown · anchor PE18 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PPE26 (family_assigned) — PPE family protein PPE26 PPE26 PE18 (family_assigned) — PE family protein PE18 PE18 PPE25 (family_assigned) — PPE family protein PPE25 PPE25 adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB Rv1352 (family_assigned) — hypothetical protein Rv1352 Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 Rv1147 (family_assigned) — methyltransferase domain-containing protein Rv1147 Rv0187 (requalified) — O-methyltransferase Rv0187 Rv2303c (family_assigned) — amidohydrolase family protein Rv2303c PPE27 (family_assigned) — PPE family protein PPE27 PPE27 Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c Rv0245 (family_assigned) — flavin reductase family protein Rv0245 Rv0213c (requalified) — methyltransferase Rv0213c Rv1786 (requalified) — ferredoxin Rv1786 Rv1794 (family_assigned) — ESX secretion-associated protein EspG Rv1794 PE25 (family_assigned) — PE family protein PE25 PE25 PE19 (family_assigned) — PE family protein PE19 PE19 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 aldA (requalified) — aldehyde dehydrogenase aldA aofH (family_assigned) — flavin monoamine oxidase family protein aofH rphA (requalified) — ribonuclease PH rphA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA murI (requalified) — glutamate racemase murI ndkA (requalified) — nucleoside-diphosphate kinase ndkA guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 Rv1351 (dark) — hypothetical protein Rv1351 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv1810 (family_assigned) — hypothetical protein Rv1810 lppO (requalified) — lipoprotein LpqH lppO Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv3092c (family_assigned) — DUF808 domain-containing protein Rv3092c Rv3096 (requalified) — 1%2C4-beta-xylanase Rv3096 Rv2405 (family_assigned) — hypothetical protein Rv2405 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1146 (requalified) — transmembrane transport protein Rv1146 Rv1145 (requalified) — transmembrane transport protein Rv1145 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 cobB (requalified) — NAD-dependent protein deacylase cobB hemZ (requalified) — ferrochelatase hemZ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.