MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1770 · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1770 (family_assigned) — hypothetical protein Rv1770 Rv1769 (requalified) — amino acid deaminase/aldolase Rv1769 Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 lipT (requalified) — carboxylesterase LipT lipT otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 otsB2 (requalified) — trehalose-phosphatase otsB2 PE_PGRS31 (family_assigned) — PE-PGRS family protein PE_PGRS31 PE_PGRS31 Rv1772 (family_assigned) — ANTAR domain-containing protein Rv1772 Rv0785 (requalified) — FAD-binding dehydrogenase Rv0785 Rv2004c (family_assigned) — AAA family ATPase Rv2004c plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD Rv2044c (family_assigned) — hypothetical protein Rv2044c gmk (requalified) — guanylate kinase gmk Rv2681 (requalified) — ribonuclease D Rv2681 rpsD (requalified) — 30S ribosomal protein S4 rpsD lpqL (family_assigned) — M28 family metallopeptidase lpqL treS (requalified) — maltose alpha-D-glucosyltransferase treS treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2402 (requalified) — trehalase Rv2402 rplD (requalified) — 50S ribosomal protein L4 rplD ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY rpsB (requalified) — 30S ribosomal protein S2 rpsB rplJ (requalified) — 50S ribosomal protein L10 rplJ rplX (requalified) — 50S ribosomal protein L24 rplX rplW (requalified) — 50S ribosomal protein L23 rplW cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv2209 (requalified) — MFS transporter Rv2209 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 iniB (requalified) — isoniazid-induced protein IniB iniB otsA (requalified) — trehalose-6-phosphate synthase otsA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.