MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1745c · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsB (family_assigned) — polyprenyl synthetase family protein idsB idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv1744c (dark) — hypothetical protein Rv1744c pknF (requalified) — serine/threonine protein kinase PknF pknF Rv3377c (requalified) — type B diterpene cyclase Rv3377c phyA (requalified) — presqualene diphosphate synthase HpnD phyA erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP garA (requalified) — glycogen accumulation regulator GarA garA pknG (requalified) — serine/threonine protein kinase PknG pknG Rv3378c (requalified) — diterpene synthase Rv3378c dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 Rv2293c (family_assigned) — hypothetical protein Rv2293c Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 Rv1815 (family_assigned) — hypothetical protein Rv1815 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.