MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1743 · 46 genes shown · anchor pstP · open gene page → · ← back to 1 hop

Evidence: Min score 0
pknE (requalified) — serine/threonine protein kinase PknE pknE pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP garA (requalified) — glycogen accumulation regulator GarA garA fhaB (family_assigned) — FHA domain-containing protein fhaB vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 Rv1742 (family_assigned) — hypothetical protein Rv1742 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 hspX (requalified) — alpha-crystallin HspX hspX fhaA (requalified) — cell division-associated protein FhaA fhaA groEL2 (requalified) — chaperonin GroEL groEL2 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1739c (family_assigned) — SulP family inorganic anion transporter Rv1739c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknD (requalified) — serine/threonine protein kinase PknD pknD Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 gdh (requalified) — NAD-glutamate dehydrogenase gdh pknG (requalified) — serine/threonine protein kinase PknG pknG Rv1829 (family_assigned) — hypothetical protein Rv1829 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c acg (family_assigned) — FMN-binding protein Acg acg Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 Rv1996 (requalified) — universal stress protein Rv1996 Rv3134c (requalified) — universal stress protein Rv3134c Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ groES (requalified) — chaperonin GroES groES groEL1 (requalified) — chaperonin GroEL groEL1 hycE (family_assigned) — NADH-quinone oxidoreductase subunit C hycE

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.