MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1742 · 46 genes shown · anchor vapC34 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1742 (family_assigned) — hypothetical protein Rv1742 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv1739c (family_assigned) — SulP family inorganic anion transporter Rv1739c pknE (requalified) — serine/threonine protein kinase PknE pknE Rv2542 (family_assigned) — alpha/beta hydrolase family protein Rv2542 iniB (requalified) — isoniazid-induced protein IniB iniB PPE5 (family_assigned) — PPE family protein PPE5 PPE5 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 uspB (family_assigned) — sugar ABC transporter permease UspB uspB vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 espB (requalified) — type VII secretion system ESX-1 target EspB espB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espI (family_assigned) — MinD/ParA family protein espI esxA (requalified) — ESAT-6 protein EsxA esxA eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks17 (requalified) — polyketide synthase pks17 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP garA (requalified) — glycogen accumulation regulator GarA garA fhaB (family_assigned) — FHA domain-containing protein fhaB iniA (requalified) — isoniazid inductible protein IniA iniA iniC (requalified) — isoniazid-induced dynamin-like GTPase IniC iniC Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c Rv2209 (requalified) — MFS transporter Rv2209 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE54 (family_assigned) — PPE family protein PPE54 PPE54 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 PPE21 (family_assigned) — PPE family protein PPE21 PPE21 PPE62 (family_assigned) — PPE family protein PPE62 PPE62 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.