MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1741 · 37 genes shown · anchor vapB34 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 Rv1742 (family_assigned) — hypothetical protein Rv1742 Rv1739c (family_assigned) — SulP family inorganic anion transporter Rv1739c pknE (requalified) — serine/threonine protein kinase PknE pknE vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 vapB36 (requalified) — antitoxin VapB36 vapB36 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks12 (requalified) — type I polyketide synthase pks12 pks17 (requalified) — polyketide synthase pks17 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP garA (requalified) — glycogen accumulation regulator GarA garA fhaB (family_assigned) — FHA domain-containing protein fhaB Rv0609A (dark) — hypothetical protein Rv0609A Rv0607 (dark) — hypothetical protein Rv0607 Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 PE_PGRS35 (family_assigned) — PE-PGRS family protein PE_PGRS35 PE_PGRS35 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.