MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1740 · 45 genes shown · anchor vapC34 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1742 (family_assigned) — hypothetical protein Rv1742 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR embR (requalified) — response regulator transcription factor EmbR embR sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 Rv1739c (family_assigned) — SulP family inorganic anion transporter Rv1739c pknE (requalified) — serine/threonine protein kinase PknE pknE vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR lat (requalified) — L-lysine 6-transaminase lat Rv3292 (family_assigned) — VOC family protein Rv3292 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c cobB (requalified) — NAD-dependent protein deacylase cobB mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS espK (family_assigned) — ESX-1 secretion-associated protein EspK espK eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 Rv0609A (dark) — hypothetical protein Rv0609A Rv0607 (dark) — hypothetical protein Rv0607 vapB36 (requalified) — antitoxin VapB36 vapB36 PE_PGRS35 (family_assigned) — PE-PGRS family protein PE_PGRS35 PE_PGRS35 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 Rv3840 (family_assigned) — transcriptional regulator Rv3840

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.