MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1729c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1729c (requalified) — class I SAM-dependent methyltransferase Rv1729c Rv1728c (requalified) — glycoside hydrolase Rv1728c Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c pptT (requalified) — 4'-phosphopantetheinyl transferase pptT eccCb1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCb1 Rv3177 (family_assigned) — alpha/beta hydrolase Rv3177 rplB (requalified) — 50S ribosomal protein L2 rplB hspR (family_assigned) — heat shock transcriptional regulator HspR hspR mmaA4 (requalified) — hydroxymycolate synthase MmaA4 mmaA4 Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ptrp (family_assigned) — hypothetical protein ptrp Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c lipD (requalified) — lipase LipD lipD Rv2000 (family_assigned) — FAD/NAD(P)-binding protein Rv2000 Rv1723 (requalified) — serine hydrolase Rv1723 Rv1367c (family_assigned) — hypothetical protein Rv1367c Rv2795c (requalified) — metallophosphoesterase Rv2795c truB (requalified) — tRNA pseudouridine(55) synthase TruB truB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ltp1 (requalified) — lipid-transfer protein ltp1 pks13 (requalified) — polyketide synthase Pks13 pks13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 esxU (requalified) — type VII secretion system ESX-4 protein EsxU esxU eccA1 (family_assigned) — type VII secretion system ESX-1 AAA family ATPase eccA1 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 papA4 (requalified) — polyketide synthase papA4 Rv3175 (requalified) — amidase Rv3175 Rv3178 (requalified) — nitroreductase Rv3178 hpx (requalified) — non-heme haloperoxidase Hpx hpx rpsO (requalified) — 30S ribosomal protein S15 rpsO rplE (requalified) — 50S ribosomal protein L5 rplE rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplX (requalified) — 50S ribosomal protein L24 rplX rpsE (requalified) — 30S ribosomal protein S5 rpsE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaK (requalified) — molecular chaperone DnaK dnaK grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.