MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1722 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1722 (requalified) — biotin carboxylase Rv1722 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 Rv1723 (requalified) — serine hydrolase Rv1723 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv2531c (requalified) — amino acid decarboxylase Rv2531c fas (requalified) — fatty acid synthase fas atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 vapB12 (requalified) — antitoxin vapB12 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 mas (requalified) — mycocerosate synthase mas accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 fabH (requalified) — beta-ketoacyl-ACP synthase III fabH vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 ribC (requalified) — riboflavin synthase ribC ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH rpe (requalified) — ribulose-phosphate 3-epimerase rpe accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 bioB (requalified) — biotin synthase BioB bioB bisC (requalified) — molybdopterin guanine dinucleotide-containing S/N- bisC vapB39 (requalified) — antitoxin VapB39 vapB39 arcA (requalified) — arginine deiminase arcA argH (requalified) — argininosuccinate lyase argH vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks6 (requalified) — membrane bound polyketide synthase pks6 atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.