MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1720c · 46 genes shown · anchor vapB12 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapB12 (requalified) — antitoxin vapB12 Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB47 (requalified) — antitoxin VapB47 vapB47 mazE9 (requalified) — antitoxin MazE9 mazE9 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC37 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC37 Rv1723 (requalified) — serine hydrolase Rv1723 Rv1722 (requalified) — biotin carboxylase Rv1722 vapC43 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC43 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 Rv1585c (family_assigned) — hypothetical protein Rv1585c vapB7 (requalified) — antitoxin vapB7 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c vapB46 (requalified) — antitoxin VapB46 vapB46 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapB35 (requalified) — antitoxin VapB35 vapB35 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapC8 (family_assigned) — PIN domain-containing protein vapC8 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazF1 (requalified) — toxin MazF1 mazF1 mazF7 (requalified) — mRNA interferase MazF7 mazF7 mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapB37 (requalified) — antitoxin vapB37 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1730c (family_assigned) — serine hydrolase domain-containing protein Rv1730c accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA Rv2531c (requalified) — amino acid decarboxylase Rv2531c fas (requalified) — fatty acid synthase fas mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.