MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1717 · 41 genes shown · anchor fadB3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv1716 (family_assigned) — hypothetical protein Rv1716 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 gltB (family_assigned) — glutamate synthase large subunit gltB PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 Rv2209 (requalified) — MFS transporter Rv2209 engA (requalified) — ribosome biogenesis GTPase Der engA PPE54 (family_assigned) — PPE family protein PPE54 PPE54 Rv3728 (requalified) — MFS transporter Rv3728 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 iniB (requalified) — isoniazid-induced protein IniB iniB espE (requalified) — type VII secretion system ESX-1 associated protein espE Rv1004c (family_assigned) — hypothetical protein Rv1004c PPE34 (family_assigned) — PPE family protein PPE34 PPE34 cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.