MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1716 · 33 genes shown · anchor fadB3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 Rv3728 (requalified) — MFS transporter Rv3728 Rv1775 (family_assigned) — hypothetical protein Rv1775 engA (requalified) — ribosome biogenesis GTPase Der engA cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB Rv1708 (requalified) — initiation inhibitor protein Rv1708 gltB (family_assigned) — glutamate synthase large subunit gltB fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT ptrp (family_assigned) — hypothetical protein ptrp Rv2113 (family_assigned) — integral membrane protein Rv2113 Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 scpA (requalified) — segregation/condensation protein A scpA dnaG (requalified) — DNA primase dnaG rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA xthA (requalified) — exodeoxyribonuclease III protein XthA xthA smc (requalified) — chromosome segregation protein SMC smc parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.