MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1713 · 46 genes shown · anchor cmk · open gene page → · ← back to 1 hop

Evidence: Min score 0
engA (requalified) — ribosome biogenesis GTPase Der engA cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG gpdA2 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA2 Rv0541c (family_assigned) — integral membrane protein Rv0541c gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 menE (requalified) — o-succinylbenzoate--CoA ligase menE rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA xthA (requalified) — exodeoxyribonuclease III protein XthA xthA smc (requalified) — chromosome segregation protein SMC smc parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB dnaB (requalified) — replicative DNA helicase dnaB dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt rphA (requalified) — ribonuclease PH rphA sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 glpD1 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD1 plsB1 (requalified) — lysophospholipid acyltransferase plsB1 plsB2 (requalified) — glycerol-3-phosphate 1-O-acyltransferase plsB2 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 Rv0218 (requalified) — molybdopterin-dependent oxidoreductase Rv0218 Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ftsQ (requalified) — cell division protein FtsQ ftsQ murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB menB (requalified) — 1,4-dihydroxy-2-naphthoyl-CoA synthase menB menC (requalified) — o-succinylbenzoate synthase menC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.