MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1712 · 46 genes shown · anchor engA · open gene page → · ← back to 1 hop

Evidence: Min score 0
cmk (requalified) — (d)CMP kinase cmk engA (requalified) — ribosome biogenesis GTPase Der engA Rv1711 (requalified) — pseudouridine synthase Rv1711 scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE ndkA (requalified) — nucleoside-diphosphate kinase ndkA panC (requalified) — pantoate--beta-alanine ligase panC nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv1708 (requalified) — initiation inhibitor protein Rv1708 dnaG (requalified) — DNA primase dnaG xthA (requalified) — exodeoxyribonuclease III protein XthA xthA smc (requalified) — chromosome segregation protein SMC smc rpsH (requalified) — 30S ribosomal protein S8 rpsH rplD (requalified) — 50S ribosomal protein L4 rplD rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsD (requalified) — 30S ribosomal protein S4 rpsD aroF (requalified) — chorismate synthase aroF aroE (requalified) — shikimate dehydrogenase aroE aroB (requalified) — 3-dehydroquinate synthase aroB aroK (requalified) — shikimate kinase AroK aroK rsgA (family_assigned) — ribosome small subunit-dependent GTPase A rsgA nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk nrdH (requalified) — redoxin NrdH nrdH nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsO (requalified) — 30S ribosomal protein S15 rpsO rpsB (requalified) — 30S ribosomal protein S2 rpsB rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsP (requalified) — 30S ribosomal protein S16 rpsP panD (requalified) — aspartate 1-decarboxylase panD Rv3600c (requalified) — type III pantothenate kinase Rv3600c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 Rv3047c (dark) — hypothetical protein Rv3047c Rv0232 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0232

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.