MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1710 · 46 genes shown · anchor scpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB scpA (requalified) — segregation/condensation protein A scpA cmk (requalified) — (d)CMP kinase cmk Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA Rv1708 (requalified) — initiation inhibitor protein Rv1708 smc (requalified) — chromosome segregation protein SMC smc Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 Rv1703c (requalified) — O-methyltransferase Rv1703c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 Rv1716 (family_assigned) — hypothetical protein Rv1716 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA xthA (requalified) — exodeoxyribonuclease III protein XthA xthA dnaG (requalified) — DNA primase dnaG parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB Rv2923c (family_assigned) — OsmC family protein Rv2923c acyP (requalified) — acylphosphatase acyP ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB aofH (family_assigned) — flavin monoamine oxidase family protein aofH adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 Rv1717 (family_assigned) — cupin domain-containing protein Rv1717 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3728 (requalified) — MFS transporter Rv3728 Rv1719 (family_assigned) — IclR family transcriptional regulator Rv1719 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 echA8 (requalified) — enoyl-CoA hydratase echA8 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC murE (requalified) — UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2%2C6-d murE murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX ftsQ (requalified) — cell division protein FtsQ ftsQ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.