MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1709 · 46 genes shown · anchor scpB · open gene page → · ← back to 1 hop

Evidence: Min score 0
scpA (requalified) — segregation/condensation protein A scpA scpB (family_assigned) — SMC-Scp complex subunit ScpB scpB Rv1708 (requalified) — initiation inhibitor protein Rv1708 cmk (requalified) — (d)CMP kinase cmk smc (requalified) — chromosome segregation protein SMC smc Rv1711 (requalified) — pseudouridine synthase Rv1711 engA (requalified) — ribosome biogenesis GTPase Der engA Rv3769 (family_assigned) — hypothetical protein Rv3769 Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 Rv1707 (family_assigned) — SulP family inorganic anion transporter Rv1707 Rv1703c (requalified) — O-methyltransferase Rv1703c panC (requalified) — pantoate--beta-alanine ligase panC ftsE (family_assigned) — cell division ATP-binding protein FtsE ftsE parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB rpsA (requalified) — 30S ribosomal protein S1 rpsA aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA Rv2923c (family_assigned) — OsmC family protein Rv2923c acyP (requalified) — acylphosphatase acyP ftsY (requalified) — signal recognition particle-docking protein FtsY ftsY fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg xthA (requalified) — exodeoxyribonuclease III protein XthA xthA dnaG (requalified) — DNA primase dnaG gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB fas (requalified) — fatty acid synthase fas Rv3768 (family_assigned) — nuclear transport factor 2 family protein Rv3768 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv2730 (dark) — hypothetical protein Rv2730 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB aofH (family_assigned) — flavin monoamine oxidase family protein aofH adhB (requalified) — alcohol dehydrogenase B adhB adh (requalified) — zinc-binding dehydrogenase adh adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 panD (requalified) — aspartate 1-decarboxylase panD Rv3600c (requalified) — type III pantothenate kinase Rv3600c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.