MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1689 · 46 genes shown · anchor pheT · open gene page → · ← back to 1 hop

Evidence: Min score 0
tyrS (requalified) — tyrosine--tRNA ligase tyrS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT mpg (requalified) — DNA-3-methyladenine glycosylase mpg tsf (requalified) — translation elongation factor Ts tsf fas (requalified) — fatty acid synthase fas argS (requalified) — arginine--tRNA ligase argS prfA (requalified) — peptide chain release factor 1 prfA Rv1687c (family_assigned) — ABC transporter ATP-binding protein Rv1687c ileS (requalified) — isoleucine--tRNA ligase ileS Rv1686c (family_assigned) — ABC transporter permease Rv1686c leuS (requalified) — leucine--tRNA ligase leuS truB (requalified) — tRNA pseudouridine(55) synthase TruB truB pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO Rv1685c (family_assigned) — TetR family transcriptional regulator Rv1685c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA tuf (requalified) — elongation factor Tu tuf atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rpsI (requalified) — 30S ribosomal protein S9 rpsI frr (requalified) — ribosome recycling factor frr rplM (requalified) — 50S ribosomal protein L13 rplM pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA gltS (requalified) — glutamate--tRNA ligase gltS metS (requalified) — methionine--tRNA ligase metS proS (requalified) — proline--tRNA ligase proS hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK rplT (requalified) — 50S ribosomal protein L20 rplT rpmE (requalified) — 50S ribosomal protein L31 rpmE rpmA (requalified) — 50S ribosomal protein L27 rpmA rpsG (requalified) — 30S ribosomal protein S7 rpsG irtB (family_assigned) — iron ABC transporter ATP-binding protein/permease irtB Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c infB (requalified) — translation initiation factor IF-2 infB pptT (requalified) — 4'-phosphopantetheinyl transferase pptT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.