MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1682 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1682 (family_assigned) — hypothetical protein Rv1682 Rv1733c (family_assigned) — hypothetical protein Rv1733c Rv0713 (dark) — DUF4436 domain-containing protein Rv0713 Rv0804 (family_assigned) — CPBP family intramembrane glutamic endopeptidase Rv0804 Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv0210 (family_assigned) — hypothetical protein Rv0210 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 rsmA (requalified) — anti-sigma-M factor RsmA rsmA moeX (requalified) — radical SAM protein moeX Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3134c (requalified) — universal stress protein Rv3134c acg (family_assigned) — FMN-binding protein Acg acg Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narK2 (requalified) — nitrate transporter NarK narK2 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv3843c (family_assigned) — DUF4328 domain-containing protein Rv3843c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c ptrp (family_assigned) — hypothetical protein ptrp purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv3896c (requalified) — transglycosylase Rv3896c fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 Rv1678 (family_assigned) — hypothetical protein Rv1678 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv0209 (family_assigned) — hypothetical protein Rv0209 trmB (requalified) — tRNA (guanosine(46)-N7)-methyltransferase TrmB trmB Rv0207c (family_assigned) — NYN domain-containing protein Rv0207c Rv2474c (family_assigned) — hypothetical protein Rv2474c Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.