MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1681 · 46 genes shown · anchor fadE16 · open gene page → · ← back to 1 hop

Evidence: Min score 0
moeX (requalified) — radical SAM protein moeX Rv1680 (family_assigned) — phosphate/phosphite/phosphonate ABC transporter su Rv1680 fadE16 (family_assigned) — acyl-CoA dehydrogenase family protein fadE16 Rv1678 (family_assigned) — hypothetical protein Rv1678 moxR3 (family_assigned) — MoxR family ATPase moxR3 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c trcR (requalified) — two-component system response regulator TrcR trcR Rv0911 (family_assigned) — VOC family protein Rv0911 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1676 (family_assigned) — peroxiredoxin-like family protein Rv1676 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1682 (family_assigned) — hypothetical protein Rv1682 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fadB (requalified) — fatty oxidation protein FadB fadB dsbF (requalified) — protein disulfide oxidoreductase dsbF Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS kdpE (requalified) — two-component system response regulator KdpE kdpE tcrY (requalified) — two component sensor kinase TcrY tcrY Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB Rv0912 (dark) — hypothetical protein Rv0912 Rv0910 (family_assigned) — SRPBCC family protein Rv0910 Rv0909 (requalified) — antitoxin Rv0909 Rv0906 (requalified) — MBL fold metallo-hydrolase Rv0906 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv1359 (family_assigned) — transcriptional regulator Rv1359 tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA sigI (requalified) — RNA polymerase sigma factor SigI sigI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.