MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1673c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1673c (family_assigned) — transglutaminase family protein Rv1673c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv2566 (family_assigned) — hypothetical protein Rv2566 Rv1672c (requalified) — MFS transporter Rv1672c Rv2567 (requalified) — circularly permuted type 2 ATP-grasp protein Rv2567 Rv0326 (family_assigned) — hypothetical protein Rv0326 Rv2569c (family_assigned) — transglutaminase family protein Rv2569c Rv1749c (family_assigned) — DUF6790 family protein Rv1749c Rv1995 (family_assigned) — hemerythrin domain-containing protein Rv1995 Rv1671 (dark) — hypothetical protein Rv1671 Rv3517 (family_assigned) — hypothetical protein Rv3517 Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv1179c (family_assigned) — DEAD/DEAH box helicase family protein Rv1179c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 embR (requalified) — response regulator transcription factor EmbR embR nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv2411c (requalified) — circularly permuted type 2 ATP-grasp protein Rv2411c Rv2568c (family_assigned) — putative zinc-binding metallopeptidase Rv2568c Rv2565 (family_assigned) — patatin-like phospholipase family protein Rv2565 Rv2410c (family_assigned) — alpha-E domain-containing protein Rv2410c Rv2409c (family_assigned) — transglutaminase family protein Rv2409c nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT sugI (requalified) — sugar-transport integral membrane protein SugI sugI glpK (requalified) — glycerol kinase GlpK glpK Rv1192 (family_assigned) — alpha/beta hydrolase Rv1192 Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 Rv0325 (family_assigned) — hypothetical protein Rv0325 Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 Rv0323c (family_assigned) — PIG-L deacetylase family protein Rv0323c Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv2570 (family_assigned) — MmcQ/YjbR family DNA-binding protein Rv2570 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv1996 (requalified) — universal stress protein Rv1996 Rv0470A (family_assigned) — hypothetical protein Rv0470A cmtR (family_assigned) — Cd(II)/Pb(II)-sensing metalloregulatory transcript cmtR vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv3479 (requalified) — transmembrane protein Rv3479

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.