MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1660 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
pks10 (requalified) — type III polyketide synthase pks10 Rv1139c (family_assigned) — isoprenylcysteine carboxyl methyltransferase famil Rv1139c Rv1138c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1138c ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks11 (requalified) — type III polyketide synthase pks11 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 ppsA (requalified) — phthiocerol type I polyketide synthase PpsA ppsA pks7 (requalified) — type I polyketide synthase pks7 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv1372 (family_assigned) — alpha-pyrone synthesis polyketide synthase-like pr Rv1372 Rv1137c (dark) — Hypothetical protein Rv1137c Rv2638 (requalified) — anti-sigma factor antagonist Rv2638 rslA (requalified) — anti-sigma-L factor RslA rslA fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA fas (requalified) — fatty acid synthase fas fadD26 (requalified) — long-chain-fatty-acid--AMP ligase FAAL26/FadD26 fadD26 ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 papA3 (requalified) — acyltransferase PapA3 papA3 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks8 (requalified) — polyketide synthase pks8 pks9 (requalified) — type I polyketide synthase pks9 pks17 (requalified) — polyketide synthase pks17 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH atpB (family_assigned) — F0F1 ATP synthase subunit A atpB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.