MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1650 · 46 genes shown · anchor pheS · open gene page → · ← back to 1 hop

Evidence: Min score 0
pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS ileS (requalified) — isoleucine--tRNA ligase ileS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO tyrS (requalified) — tyrosine--tRNA ligase tyrS fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA thrS (requalified) — threonine--tRNA ligase thrS rpsC (requalified) — 30S ribosomal protein S3 rpsC alaS (requalified) — alanine--tRNA ligase alaS rplP (requalified) — 50S ribosomal protein L16 rplP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA Rv1647 (requalified) — adenylate cyclase Rv1647 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI metS (requalified) — methionine--tRNA ligase metS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c proS (requalified) — proline--tRNA ligase proS rpsR2 (requalified) — 30S ribosomal protein S18 rpsR2 rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsF (requalified) — 30S ribosomal protein S6 rpsF rpsI (requalified) — 30S ribosomal protein S9 rpsI rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC sigA (requalified) — RNA polymerase sigma factor sigA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rplN (requalified) — 50S ribosomal protein L14 rplN rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplX (requalified) — 50S ribosomal protein L24 rplX mpg (requalified) — DNA-3-methyladenine glycosylase mpg tsf (requalified) — translation elongation factor Ts tsf fas (requalified) — fatty acid synthase fas prfA (requalified) — peptide chain release factor 1 prfA fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP rplJ (requalified) — 50S ribosomal protein L10 rplJ

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.