MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1648 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1648 (family_assigned) — rhomboid-like protein Rv1648 Rv1647 (requalified) — adenylate cyclase Rv1647 ptrp (family_assigned) — hypothetical protein ptrp Rv0493c (family_assigned) — hypothetical protein Rv0493c Rv3835 (family_assigned) — septum formation family protein Rv3835 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv3909 (dark) — hypothetical protein Rv3909 Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 ureD (requalified) — urease accessory protein UreD ureD PE17 (family_assigned) — PE family protein PE17 PE17 Rv0312 (family_assigned) — Hsp70 family protein Rv0312 rsdA (requalified) — anti-sigma D factor RsdA rsdA pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645 Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv0492c (family_assigned) — GMC family oxidoreductase Rv0492c Rv0492A (family_assigned) — hypothetical protein Rv0492A Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 lprA (requalified) — TLR2 agonist LprA lprA Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 serS (requalified) — serine--tRNA ligase serS ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv2844 (family_assigned) — ferritin-like domain-containing protein Rv2844 nusA (requalified) — transcription termination factor NusA nusA rimP (requalified) — ribosome maturation factor RimP rimP ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 mfd (requalified) — transcription-repair coupling factor mfd

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.