MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1645c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1645c (family_assigned) — oxygenase MpaB family protein Rv1645c Rv1647 (requalified) — adenylate cyclase Rv1647 Rv0825c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0825c Rv0910 (family_assigned) — SRPBCC family protein Rv0910 Rv1919c (family_assigned) — SRPBCC family protein Rv1919c Rv0135c (family_assigned) — helix-turn-helix domain-containing protein Rv0135c Rv0276 (family_assigned) — oxygenase MpaB family protein Rv0276 pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS Rv1546 (family_assigned) — SRPBCC family protein Rv1546 Rv2237 (family_assigned) — hypothetical protein Rv2237 Rv0275c (family_assigned) — transcriptional regulator Rv0275c PE17 (family_assigned) — PE family protein PE17 PE17 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1648 (family_assigned) — rhomboid-like protein Rv1648 Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645 Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv0826 (family_assigned) — oxygenase MpaB family protein Rv0826 desA1 (requalified) — acyl-ACP desaturase DesA desA1 dusB (requalified) — tRNA dihydrouridine synthase DusB dusB Rv0909 (requalified) — antitoxin Rv0909 Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 lpqE (family_assigned) — hypothetical protein lpqE Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv1920 (family_assigned) — lysophospholipid acyltransferase family protein Rv1920 Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 cyp138 (requalified) — cytochrome P450 cyp138 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv1353c (family_assigned) — TetR/AcrR family transcriptional regulator C-termi Rv1353c Rv3430c (requalified) — transposase Rv3430c Rv1683 (requalified) — acyl-CoA synthetase Rv1683 Rv1132 (family_assigned) — DUF3556 domain-containing protein Rv1132 rplP (requalified) — 50S ribosomal protein L16 rplP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI thrS (requalified) — threonine--tRNA ligase thrS dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv1543 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1543 Rv1544 (family_assigned) — SDR family oxidoreductase Rv1544 Rv1545 (dark) — hypothetical protein Rv1545 cobD (requalified) — cobalamin biosynthesis protein cobD Rv1429 (family_assigned) — PucR family transcriptional regulator Rv1429 Rv2620c (dark) — hypothetical protein Rv2620c Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.