MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1640c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX lysS (requalified) — lysine--tRNA ligase lysS gltS (requalified) — glutamate--tRNA ligase gltS ileS (requalified) — isoleucine--tRNA ligase ileS metS (requalified) — methionine--tRNA ligase metS guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA argS (requalified) — arginine--tRNA ligase argS proS (requalified) — proline--tRNA ligase proS leuS (requalified) — leucine--tRNA ligase leuS atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH rpsD (requalified) — 30S ribosomal protein S4 rpsD prfB (requalified) — peptide chain release factor PrfB prfB fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 rplW (requalified) — 50S ribosomal protein L23 rplW rplR (requalified) — 50S ribosomal protein L18 rplR rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rplJ (requalified) — 50S ribosomal protein L10 rplJ pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT tatD (requalified) — deoxyribonuclease TatD tatD metH (requalified) — methionine synthase metH guaB2 (requalified) — IMP dehydrogenase guaB2 guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 apt (requalified) — adenine phosphoribosyltransferase apt rplK (requalified) — 50S ribosomal protein L11 rplK Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC rplU (requalified) — 50S ribosomal protein L21 rplU rpmA (requalified) — 50S ribosomal protein L27 rpmA rplL (requalified) — 50S ribosomal protein L7/L12 rplL rplP (requalified) — 50S ribosomal protein L16 rplP rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.