MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1628c · 43 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1628c (family_assigned) — Zn-ribbon domain-containing OB-fold protein Rv1628c Rv1627c (requalified) — lipid-transfer protein Rv1627c ltp3 (family_assigned) — thiolase domain-containing protein ltp3 ltp2 (requalified) — lipid-transfer protein ltp2 polA (requalified) — DNA polymerase I polA ltp4 (family_assigned) — thiolase domain-containing protein ltp4 ltp1 (requalified) — lipid-transfer protein ltp1 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 fadA3 (requalified) — acetyl-CoA C-acetyltransferase fadA3 fadA5 (requalified) — steroid 3-ketoacyl-CoA thiolase fadA5 fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadB (requalified) — fatty oxidation protein FadB fadB echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 echA15 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA15 echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 echA10 (requalified) — enoyl-CoA hydratase echA10 Rv3521 (family_assigned) — hypothetical protein Rv3521 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 acs (requalified) — acetate--CoA ligase acs chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1 fadE29 (requalified) — acyl-CoA dehydrogenase FadE29 fadE29 fadE28 (requalified) — acyl-CoA dehydrogenase FadE28 fadE28 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 glcB (requalified) — malate synthase G glcB leuA (requalified) — 2-isopropylmalate synthase leuA Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.