MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1623c · 45 genes shown · anchor cydB · open gene page → · ← back to 1 hop

Evidence: Min score 0
cydA (family_assigned) — cytochrome D ubiquinol oxidase subunit I CydA cydA cydB (family_assigned) — cytochrome d ubiquinol oxidase subunit II cydB cydD (family_assigned) — cytochrome biosyntheisis ABC transporter ATP-bindi cydD cydC (family_assigned) — thiol reductant ABC exporter subunit CydC cydC Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c cya (requalified) — adenylate cyclase cya panD (requalified) — aspartate 1-decarboxylase panD menH (requalified) — demethylmenaquinone methyltransferase menH purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv3239c (requalified) — MFS transporter Rv3239c Rv3728 (requalified) — MFS transporter Rv3728 ndh (requalified) — NAD(P)/FAD-dependent oxidoreductase ndh narG (family_assigned) — nitrate reductase subunit alpha narG Rv2952 (requalified) — phthiotriol/phenolphthiotriol dimycocerosates meth Rv2952 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c mgtC (family_assigned) — MgtC/SapB family protein mgtC relA (family_assigned) — RelA/SpoT family protein relA pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 panC (requalified) — pantoate--beta-alanine ligase panC Rv3600c (requalified) — type III pantothenate kinase Rv3600c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c aldA (requalified) — aldehyde dehydrogenase aldA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c menA (requalified) — 1%2C4-dihydroxy-2-naphthoate polyprenyltransferase menA mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 menC (requalified) — o-succinylbenzoate synthase menC bpoC (family_assigned) — alpha/beta hydrolase bpoC purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH purD (requalified) — phosphoribosylamine--glycine ligase purD purN (requalified) — phosphoribosylglycinamide formyltransferase purN glyA1 (requalified) — serine hydroxymethyltransferase glyA1 Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c nadE (requalified) — NAD(+) synthase nadE pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.