MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1614 · 46 genes shown · anchor trpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA yidC (requalified) — membrane protein insertase YidC yidC Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c nuoL (family_assigned) — NADH-quinone oxidoreductase subunit L nuoL pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB rpsE (requalified) — 30S ribosomal protein S5 rpsE Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv2128 (dark) — hypothetical protein Rv2128 trpE (requalified) — anthranilate synthase component I trpE trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpG (requalified) — anthranilate synthase component II trpG mbtI (requalified) — salicylate synthase mbtI Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 glf (requalified) — UDP-galactopyranose mutase glf rnpA (requalified) — ribonuclease P protein component rnpA secY (family_assigned) — preprotein translocase subunit SecY secY yidD (requalified) — membrane protein insertion efficiency factor YidD yidD secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 Rv2258c (requalified) — class I SAM-dependent methyltransferase Rv2258c Rv2256c (dark) — hypothetical protein Rv2256c mscR (requalified) — S-(hydroxymethyl)mycothiol dehydrogenase mscR Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv2908c (family_assigned) — RNA-binding protein Rv2908c parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB nuoK (family_assigned) — NADH-quinone oxidoreductase subunit NuoK nuoK nuoN (family_assigned) — NADH-quinone oxidoreductase subunit NuoN nuoN nuoJ (family_assigned) — NADH-quinone oxidoreductase subunit J nuoJ nuoH (family_assigned) — NADH-quinone oxidoreductase subunit NuoH nuoH nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pknA (requalified) — serine/threonine protein kinase PknA pknA garA (requalified) — glycogen accumulation regulator GarA garA fhaA (requalified) — cell division-associated protein FhaA fhaA fhaB (family_assigned) — FHA domain-containing protein fhaB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.