MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1546 · 46 genes shown · anchor dnaE1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1546 (family_assigned) — SRPBCC family protein Rv1546 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv1543 (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1543 Rv1544 (family_assigned) — SDR family oxidoreductase Rv1544 lpqE (family_assigned) — hypothetical protein lpqE Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv1545 (dark) — hypothetical protein Rv1545 Rv3217c (dark) — hypothetical protein Rv3217c Rv3346c (dark) — DUF3017 domain-containing protein Rv3346c Rv3527 (family_assigned) — hypothetical protein Rv3527 Rv3415c (family_assigned) — hypothetical protein Rv3415c lprF (requalified) — lipoprotein LprF lprF octT (requalified) — diglucosylglycerate octanoyltransferase octT dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap tgs2 (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr tgs2 Rv3740c (family_assigned) — wax ester/triacylglycerol synthase family O-acyltr Rv3740c Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fabG2 (requalified) — 3-oxoacyl-ACP reductase FabG fabG2 Rv2876 (requalified) — transmembrane protein Rv2876 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrA (requalified) — hypothetical protein qcrA ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv0514 (dark) — hypothetical protein Rv0514 hemD (requalified) — uroporphyrin-III C-methyltransferase hemD hemC (requalified) — hydroxymethylbilane synthase hemC hemB (requalified) — porphobilinogen synthase hemB hemA (requalified) — glutamyl-tRNA reductase hemA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA glbN (requalified) — group 1 truncated hemoglobin GlbN glbN darT (requalified) — toxin-antitoxin system toxin DarT darT Rv0358 (requalified) — peptidase M50 Rv0358 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv1083 (dark) — hypothetical protein Rv1083 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1476 (family_assigned) — DUF6676 family protein Rv1476

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.