MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1540 · 46 genes shown · anchor lspA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1540 (requalified) — RNA pseudouridine synthase Rv1540 lspA (requalified) — signal peptidase II lspA rplC (requalified) — 50S ribosomal protein L3 rplC rplO (requalified) — 50S ribosomal protein L15 rplO rplM (requalified) — 50S ribosomal protein L13 rplM rplU (requalified) — 50S ribosomal protein L21 rplU rplQ (requalified) — 50S ribosomal protein L17 rplQ rplX (requalified) — 50S ribosomal protein L24 rplX rsfS (requalified) — ribosome silencing factor rsfS rplK (requalified) — 50S ribosomal protein L11 rplK rplN (requalified) — 50S ribosomal protein L14 rplN ansA (requalified) — asparaginase ansA obg (requalified) — GTPase ObgE obg rbfA (requalified) — 30S ribosome-binding factor RbfA rbfA ileS (requalified) — isoleucine--tRNA ligase ileS ftsW (family_assigned) — putative lipid II flippase FtsW ftsW lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rpmE (requalified) — 50S ribosomal protein L31 rpmE rplF (requalified) — 50S ribosomal protein L6 rplF rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpmF (requalified) — 50S ribosomal protein L32 rpmF rpsI (requalified) — 30S ribosomal protein S9 rpsI rplD (requalified) — 50S ribosomal protein L4 rplD nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD rplS (requalified) — 50S ribosomal protein L19 rplS rplJ (requalified) — 50S ribosomal protein L10 rplJ rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B rplA (requalified) — 50S ribosomal protein L1 rplA rpmD (requalified) — 50S ribosomal protein L30 rpmD rplI (requalified) — 50S ribosomal protein L9 rplI argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA gadB (requalified) — glutamate decarboxylase gadB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.