MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1534 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1534 (family_assigned) — TetR family transcriptional regulator Rv1534 Rv1533 (family_assigned) — nitronate monooxygenase family protein Rv1533 Rv1532c (family_assigned) — PaaI family thioesterase Rv1532c Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0238 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0238 pth (requalified) — aminoacyl-tRNA hydrolase pth Rv3239c (requalified) — MFS transporter Rv3239c Rv3728 (requalified) — MFS transporter Rv3728 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 ileS (requalified) — isoleucine--tRNA ligase ileS alkB (requalified) — alkane 1-monooxygenase alkB Rv3312c (family_assigned) — alpha/beta hydrolase Rv3312c Rv1393c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv1393c fas (requalified) — fatty acid synthase fas mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB papA1 (requalified) — acyltransferase PapA1 papA1 papA3 (requalified) — acyltransferase PapA3 papA3 papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC2 (family_assigned) — PIN domain nuclease vapC2 eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 lpqI (requalified) — lipoprotein LpqI lpqI vapB24 (requalified) — antitoxin vapB24 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv0158 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0158 Rv0236A (dark) — hypothetical protein Rv0236A rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY ychF (requalified) — redox-regulated ATPase YchF ychF mfd (requalified) — transcription-repair coupling factor mfd lpqT (requalified) — lipoprotein LpqT lpqT mesJ (requalified) — tRNA lysidine(34) synthetase TilS mesJ atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3238c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv3238c nadE (requalified) — NAD(+) synthase nadE Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv1716 (family_assigned) — hypothetical protein Rv1716 Rv1718 (requalified) — 3-keto-5-aminohexanoate cleavage protein Rv1718 Rv3727 (requalified) — FAD-dependent oxidoreductase Rv3727

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.