MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1513 · 38 genes shown · anchor epiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1513 (family_assigned) — FkbM family methyltransferase Rv1513 epiA (requalified) — GDP-L-fucose synthase epiA gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 Rv2960c (dark) — hypothetical protein Rv2960c purU (requalified) — formyltetrahydrofolate deformylase purU gca (requalified) — GDP-mannose 4%2C6-dehydratase gca Rv1508A (family_assigned) — hypothetical protein Rv1508A rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB rplD (requalified) — 50S ribosomal protein L4 rplD Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c Rv1516c (requalified) — glycosyltransferase Rv1516c Rv1518 (requalified) — glycosyltransferase Rv1518 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv2075c (family_assigned) — hypothetical protein Rv2075c vapC16 (requalified) — ribonuclease VapC16 vapC16 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB hisN (requalified) — histidinol-phosphatase hisN cyp121 (requalified) — mycocyclosin synthase Cyp121 cyp121 cyp141 (requalified) — cytochrome P450 Cyp141 cyp141 Rv2956 (requalified) — [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyrano Rv2956 Rv1520 (requalified) — glycosyltransferase Rv1520 Rv2955c (requalified) — [2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-r Rv2955c Rv2961 (requalified) — transposase Rv2961 Rv2954c (requalified) — [2%2C4-di-O-methyl-alpha-L-fucopyranosyl-(1->3)-al Rv2954c folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD glyA1 (requalified) — serine hydroxymethyltransferase glyA1 glyA2 (requalified) — serine hydroxymethyltransferase glyA2 purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvT (requalified) — aminomethyltransferase gcvT metH (requalified) — methionine synthase metH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.