MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1512 · 46 genes shown · anchor gmdA · open gene page → · ← back to 1 hop

Evidence: Min score 0
epiA (requalified) — GDP-L-fucose synthase epiA gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA gca (requalified) — GDP-mannose 4%2C6-dehydratase gca Rv1508A (family_assigned) — hypothetical protein Rv1508A Rv1513 (family_assigned) — FkbM family methyltransferase Rv1513 rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsN1 (requalified) — 30S ribosomal protein S14 rpsN1 rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 rpsH (requalified) — 30S ribosomal protein S8 rpsH manB (requalified) — D-alpha-D-mannose-1-phosphate guanylyltransferase manB rplD (requalified) — 50S ribosomal protein L4 rplD Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA Rv1509 (family_assigned) — methyltransferase domain-containing protein Rv1509 Rv1508c (family_assigned) — glycosyltransferase 87 family protein Rv1508c Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv2959c (requalified) — rhamnosyl O-methyltransferase Rv2959c Rv2958c (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957 rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplP (requalified) — 50S ribosomal protein L16 rplP rpsF (requalified) — 30S ribosomal protein S6 rpsF rplT (requalified) — 50S ribosomal protein L20 rplT rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rplV (requalified) — 50S ribosomal protein L22 rplV rpsK (requalified) — 30S ribosomal protein S11 rpsK rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpmG2 (requalified) — 50S ribosomal protein L33 rpmG2 rplR (requalified) — 50S ribosomal protein L18 rplR rpmA (requalified) — 50S ribosomal protein L27 rpmA rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rpsM (requalified) — 30S ribosomal protein S13 rpsM rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rplN (requalified) — 50S ribosomal protein L14 rplN

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.