MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1508A · 46 genes shown · anchor epiA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1508A (family_assigned) — hypothetical protein Rv1508A epiA (requalified) — GDP-L-fucose synthase epiA Rv1509 (family_assigned) — methyltransferase domain-containing protein Rv1509 Rv1514c (family_assigned) — glycosyltransferase family 2 protein Rv1514c gca (requalified) — GDP-mannose 4%2C6-dehydratase gca Rv1508c (family_assigned) — glycosyltransferase 87 family protein Rv1508c Rv1510 (family_assigned) — hypothetical protein Rv1510 Rv0139 (family_assigned) — NAD-dependent epimerase/dehydratase family protein Rv0139 Rv3468c (requalified) — dTDP-glucose 4,6-dehydratase Rv3468c Rv1106c (requalified) — 3 beta-hydroxysteroid dehydrogenase/delta 5-->4-is Rv1106c Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 Rv3725 (requalified) — oxidoreductase Rv3725 galE2 (family_assigned) — SDR family oxidoreductase galE2 gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA Rv1513 (family_assigned) — FkbM family methyltransferase Rv1513 rpsS (requalified) — 30S ribosomal protein S19 rpsS rpsL (requalified) — 30S ribosomal protein S12 rpsL Rv1507c (family_assigned) — WbqC family protein Rv1507c Rv1503c (family_assigned) — Conserved hypothetical protein Rv1503c Rv1515c (family_assigned) — methyltransferase domain-containing protein Rv1515c Rv1516c (requalified) — glycosyltransferase Rv1516c Rv1518 (requalified) — glycosyltransferase Rv1518 gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA lipM (family_assigned) — alpha/beta hydrolase lipM tgs3 (requalified) — diacyglycerol O-acyltransferase tgs3 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA glf (requalified) — UDP-galactopyranose mutase glf rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 msrA (requalified) — peptide-methionine (S)-S-oxide reductase MsrA msrA Rv0140 (family_assigned) — DUF427 domain-containing protein Rv0140 rpsQ (requalified) — 30S ribosomal protein S17 rpsQ galE1 (requalified) — UDP-glucose 4-epimerase galE1 mhpE (requalified) — 4-hydroxy-2-oxovalerate aldolase mhpE galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU cyp142 (requalified) — steroid C26-monooxygenase Cyp142 cyp142 cyp125 (requalified) — steroid C26-monooxygenase cyp125 choD (requalified) — cholesterol oxidase choD xseB (family_assigned) — exodeoxyribonuclease VII small subunit xseB xseA (family_assigned) — exodeoxyribonuclease VII large subunit xseA Rv1109c (requalified) — lipid droplet-associated protein Rv1109c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.