MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1486c · 46 genes shown · anchor rsbW · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv2743c (family_assigned) — hypothetical protein Rv2743c rsbW (requalified) — anti-sigma B factor RsbW rsbW lppL (family_assigned) — hypothetical protein lppL Rv3212 (family_assigned) — hypothetical protein Rv3212 lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2712c (dark) — DUF4192 domain-containing protein Rv2712c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv1487 (family_assigned) — NfeD family protein Rv1487 ftsH (requalified) — ATP-dependent zinc metalloprotease FtsH ftsH Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 mpa (requalified) — proteasome ATPase mpa lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv1489A (family_assigned) — hypothetical protein Rv1489A Rv1490 (family_assigned) — hypothetical protein Rv1490 Rv2585c (family_assigned) — ABC transporter substrate-binding protein Rv2585c Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 Rv0497 (family_assigned) — hypothetical protein Rv0497 35kd_ag (family_assigned) — hypothetical protein 35kd_ag pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ Rv3707c (requalified) — hypothetical protein Rv3707c sigF (requalified) — RNA polymerase sigma factor SigF sigF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsfA (requalified) — anti-sigma-F factor antagonist RsfA rsfA Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 rsfB (family_assigned) — STAS domain-containing protein rsfB usfY (family_assigned) — hypothetical protein usfY Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996 rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 thiX (family_assigned) — thioredoxin family protein thiX ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lprC (family_assigned) — DUF3558 domain-containing protein lprC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.