MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1477 · 41 genes shown · anchor ripB · open gene page → · ← back to 1 hop

Evidence: Min score 0
ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB pirG (requalified) — exported repetitive protein pirG ripD (family_assigned) — NlpC/P60 family peptidoglycan-binding protein RipD ripD Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 ftsW (family_assigned) — putative lipid II flippase FtsW ftsW Rv0312 (family_assigned) — Hsp70 family protein Rv0312 Rv1157c (dark) — hypothetical protein Rv1157c sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD lipL (family_assigned) — serine hydrolase domain-containing protein lipL Rv1480 (family_assigned) — DUF58 domain-containing protein Rv1480 Rv1481 (family_assigned) — VWA domain-containing protein Rv1481 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv1158c (dark) — hypothetical protein Rv1158c Rv1565c (family_assigned) — acyltransferase family protein Rv1565c Rv2525c (family_assigned) — DUF1906 domain-containing protein Rv2525c Rv0039c (dark) — hypothetical protein Rv0039c murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsQ (requalified) — cell division protein FtsQ ftsQ murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD htpG (requalified) — molecular chaperone HtpG htpG grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv3717 (family_assigned) — hypothetical protein Rv3717 meaB (requalified) — methylmalonyl Co-A mutase-associated GTPase MeaB meaB mutA (family_assigned) — methylmalonyl-CoA mutase small subunit mutA mazF4 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF4 mazE4 (requalified) — type II toxin-antitoxin system antitoxin MazE4 mazE4 moxR1 (family_assigned) — transcriptional regulator MoxR1 moxR1 moxR3 (family_assigned) — MoxR family ATPase moxR3 moxR2 (family_assigned) — MoxR family ATPase moxR2 rnhB (requalified) — ribonuclease HII rnhB Rv0958 (family_assigned) — ATP-binding protein Rv0958 Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.