MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1475c · 46 genes shown · anchor prpC · open gene page → · ← back to 1 hop

Evidence: Min score 0
acn (requalified) — iron-regulated aconitate hydratase Acn acn prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA gltA2 (requalified) — citrate synthase gltA2 icd1 (requalified) — NADP-dependent isocitrate dehydrogenase icd1 icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 icl1 (requalified) — isocitrate lyase icl1 aceAa (requalified) — isocitrate lyase AceAa aceAa aceAb (requalified) — isocitrate lyase AceAb aceAb Rv1474c (family_assigned) — helix-turn-helix domain-containing protein Rv1474c sodA (requalified) — superoxide dismutase sodA rplS (requalified) — 50S ribosomal protein L19 rplS rpmF (requalified) — 50S ribosomal protein L32 rpmF prpD (requalified) — 2-methylcitrate dehydratase prpD mdh (requalified) — malate dehydrogenase mdh acs (requalified) — acetate--CoA ligase acs bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC glcB (requalified) — malate synthase G glcB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c purB (requalified) — adenylosuccinate lyase purB fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 ackA (requalified) — acetate kinase ackA Rv2280 (family_assigned) — Probable dehydrogenase Rv2280 Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c Rv0948c (requalified) — chorismate mutase Rv0948c lprD (family_assigned) — hypothetical protein lprD rplQ (requalified) — 50S ribosomal protein L17 rplQ rplO (requalified) — 50S ribosomal protein L15 rplO rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplM (requalified) — 50S ribosomal protein L13 rplM rplC (requalified) — 50S ribosomal protein L3 rplC Rv2367c (requalified) — endoribonuclease Rv2367c rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rpsH (requalified) — 30S ribosomal protein S8 rpsH rpmH (requalified) — 50S ribosomal protein L34 rpmH rpsF (requalified) — 30S ribosomal protein S6 rpsF rplP (requalified) — 50S ribosomal protein L16 rplP rplV (requalified) — 50S ribosomal protein L22 rplV rplT (requalified) — 50S ribosomal protein L20 rplT tuf (requalified) — elongation factor Tu tuf

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.