MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1471 · 46 genes shown · anchor trxA · open gene page → · ← back to 1 hop

Evidence: Min score 0
trxB1 (requalified) — thioredoxin trxB1 trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 csd (requalified) — cysteine desulfurase csd trxA (family_assigned) — thioredoxin family protein trxA echA12 (requalified) — enoyl-CoA hydratase echA12 Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv1473 (family_assigned) — macrolide ABC transporter ATP-binding protein Rv1473 ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD arsC (family_assigned) — ACR3 family arsenite efflux transporter arsC htpG (requalified) — molecular chaperone HtpG htpG groEL2 (requalified) — chaperonin GroEL groEL2 groEL1 (requalified) — chaperonin GroEL groEL1 Rv0794c (requalified) — oxidoreductase Rv0794c trxC (requalified) — thioredoxin trxC ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1324 (requalified) — co-chaperone YbbN Rv1324 Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC infA (requalified) — translation initiation factor IF-1 infA Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c Rv1473A (family_assigned) — transcriptional regulator Rv1473A rpsI (requalified) — 30S ribosomal protein S9 rpsI rplO (requalified) — 50S ribosomal protein L15 rplO rpsP (requalified) — 30S ribosomal protein S16 rpsP rplU (requalified) — 50S ribosomal protein L21 rplU Rv0312 (family_assigned) — Hsp70 family protein Rv0312 spmT (requalified) — sphingomyelinase spmT sodC (family_assigned) — superoxide dismutase family protein sodC Rv2642 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2642 cadI (requalified) — cadmium-induced metalloenzyme CadI cadI Rv2640c (family_assigned) — Rv2640c family ArsR-like transcriptional regulator Rv2640c Rv0324 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv0324 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dnaK (requalified) — molecular chaperone DnaK dnaK

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.