MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1456c · 29 genes shown · anchor ctaB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1456c (requalified) — heme A synthase Rv1456c ctaB (requalified) — heme o synthase ctaB Rv1457c (family_assigned) — ABC transporter permease Rv1457c Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c Rv2235 (family_assigned) — SURF1 family protein Rv2235 mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB qcrA (requalified) — hypothetical protein qcrA qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaE (family_assigned) — heme-copper oxidase subunit III ctaE ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC hemZ (requalified) — ferrochelatase hemZ csd (requalified) — cysteine desulfurase csd Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c mptA (requalified) — alpha-(1->6)-mannopyranosyltransferase A mptA Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.