MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1451 · 45 genes shown · anchor ctaD · open gene page → · ← back to 1 hop

Evidence: Min score 0
ctaB (requalified) — heme o synthase ctaB ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaE (family_assigned) — heme-copper oxidase subunit III ctaE ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC Rv1456c (requalified) — heme A synthase Rv1456c hemZ (requalified) — ferrochelatase hemZ qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2235 (family_assigned) — SURF1 family protein Rv2235 tal (requalified) — transaldolase tal tkt (requalified) — transketolase tkt zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv1444c (family_assigned) — hypothetical protein Rv1444c qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv1457c (family_assigned) — ABC transporter permease Rv1457c Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB hemY (requalified) — protoporphyrinogen oxidase hemY hemQ (requalified) — hydrogen peroxide-dependent heme synthase hemQ hemE (requalified) — uroporphyrinogen decarboxylase hemE Rv0958 (family_assigned) — ATP-binding protein Rv0958 mmcO (requalified) — multicopper oxidase MmcO mmcO Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c ptpA (requalified) — protein-tyrosine-phosphatase ptpA ptkA (family_assigned) — protein tyrosine kinase transcriptional regulator ptkA Rv2229c (family_assigned) — zinc ribbon domain-containing protein Rv2229c Rv2228c (requalified) — multifunctional RNASE H/alpha-ribazole phosphatase Rv2228c Rv2230c (requalified) — Nif3-like dinuclear metal center hexameric protein Rv2230c pgi (requalified) — glucose-6-phosphate isomerase pgi fba (requalified) — class II fructose-bisphosphate aldolase fba pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB tpi (requalified) — triose-phosphate isomerase tpi rpe (requalified) — ribulose-phosphate 3-epimerase rpe glpX (requalified) — class II fructose-bisphosphatase glpX devB (requalified) — 6-phosphogluconolactonase devB gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 opcA (requalified) — glucose-6-phosphate dehydrogenase assembly protein opcA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.