MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1450c · 34 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS27 (family_assigned) — PE-PGRS family protein PE_PGRS27 PE_PGRS27 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5 eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 mycP5 (requalified) — type VII secretion system ESX-5 serine protease my mycP5 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB PPE64 (family_assigned) — PPE family protein PPE64 PPE64 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 eccC5 (requalified) — ESX-5 type VII secretion system protein EccC5 eccC5 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccA5 (family_assigned) — type VII secretion system ESX-5 AAA family ATPase eccA5 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv0176 (family_assigned) — RDD family protein Rv0176 mltG (requalified) — endolytic transglycosylase MltG mltG eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 rpe (requalified) — ribulose-phosphate 3-epimerase rpe upp (requalified) — uracil phosphoribosyltransferase upp tkt (requalified) — transketolase tkt gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 rbsK (requalified) — ribokinase RbsK rbsK gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS48 (family_assigned) — PE-PGRS family protein PE_PGRS48 PE_PGRS48 PE_PGRS2 (family_assigned) — PE-PGRS family protein PE_PGRS2 PE_PGRS2 PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.